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Scientist/Sr. Scientist, Spatial Omics Technology Development (Fixed-Term Contract)

Arc Institute· Technology Centers
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Palo Alto, CA$128.5k - $182.5kfixed-term contractPosted 4w ago

About the role

18-month fixed-term scientist position focused on imaging-based spatial technology development for the Alzheimer's Disease Initiative, including stabilizing a custom imaging platform, adapting homebrew chemistry to arrayed human organoids, and advancing spatial perturb-seq workflows from proof-of-concept to a screen-ready platform for large-scale studies.

Responsibilities

  • Design and execute system testing and validation plans for the current custom in-house spatial imaging platform.
  • Work directly with external vendors to troubleshoot and resolve hardware and software issues.
  • Collaborate with the spatial omics project lead and internal partners to optimize spatial multiomic chemistry and sample-prep workflows for human stem-cell-derived brain organoids, adapting protocols validated in mouse tissue.
  • Execute end-to-end wet lab spatial perturb-seq workflows.
  • Collaborate with computational scientists to analyze imaging QC data and drive iterative assay development and decision-making.
  • Track progress against key milestones and report on progress in internal meetings. Collaborate to move projects from proof-of-concept through development and screens.

Qualifications

  • PhD in molecular biology, biochemistry, genomics, bioengineering, or a related field, with 2-5+ years of experience in academia or the biotechnology industry.
  • Extensive experience in spatial omics technology and/or product development.
  • Hands-on experience with custom imaging and/or fluidic systems, including instrument troubleshooting.
  • Hands-on experience with tissue or organoid sample prep and in situ imaging-based assays (e.g., HCR, MERFISH, seqFISH, RCA, in situ sequencing).
  • Hands-on experience with tissue microarray or low-input histology is a plus.
  • Experience with image processing or spatial data analysis is a plus.
  • Background in neuroscience, stem cell biology, or immunology is a plus.
  • Comfortable working in a fast-paced, early-stage technology development environment with substantial hands-on troubleshooting.
  • Strong collaboration and communication skills across multiple teams.
  • Strong project management and documentation skills.

Skills

Required:System testing and validationHardware/software troubleshootingSpatial multiomic workflow optimizationWet lab execution (spatial perturb-seq)
Nice to have:Data analysis (imaging QC)
Last updated Sep 23, 2026. Interested? Apply on the company site.
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